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The whisker-related portion of the primary somatosensory (S1) area (the ‘barrel cortex’) in rodents exhibits a topological arrangement that mirrors the peripheral (contralateral) tactile receptors, the vibrissae (whisker hairs) on the rodent’s snout. In cortical layer 4, barrel-like cytoarchitectonic units are discernible, each of which represents a single whisker hair (Woolsey and van der Loos, 1970). The extension of the borders of layer 4 (L4) barrels throughout all cortical layers has been taken to define a vertical barrel ‘column’ which is the anatomical correlate of a cortical column (Szentágothai, 1975). Because of this well-defined organisation, the barrel cortex has become a model system for investigating synaptic microcircuits and even long-range synaptic connectivity related to the structural representation of sensory receptors (for recent reviews see e.g. Fox, 2008; Bosman et al., 2011; Feldmeyer et al., 2013). 
This chapter will concentrate on the excitatory microcircuit in the S1 barrel cortex, for which a comprehensive structure and function relationship is now emerging. 

==Thalamocortical input to the barrel cortex==

Sensory information detected by the whisker hairs on the rodent’s snout arrives in the barrel cortex via several different ‘pathways’. Each of these whisker-to-barrel cortex pathways consists of a four-neuron relay that links the sensory receptor with the S1 barrel cortex: a trigeminal ganglion cell, a trigeminothalamic neuron, a thalamocortical neuron and the intracortical target neurons (see the Scholarpedia chapter by Deschênes, 2009 for details). The most prominent parallel pathways are the so-called lemniscal, extralemniscal and paralemniscal pathways (Yu et al., 2006; Diamond et al., 2008; Bosman et al., 2011; see also Scholarpedia chapter by Deschênes, 2009). These pathways encode different aspects of vibrissae sensory signals.   
The lemniscal pathway runs through the principal trigeminal nucleus and projects to the dorsomedial (dm) portion of the ventroposterior medial (VPM) nucleus of the whisker-related thalamus; its cortical targets are described below. Cytoarchitectonic units analogous to the cortical L4 barrels can be found both in the principal trigeminal nucleus and the VPM where they are called barrelettes and barreloids, respectively. The lemniscal pathway combines both whisker motion (whisking) and object location (touch) information and conveys them to the S1 barrel cortex (Yu et al., 2006).
The extralemniscal pathway relays whisker signals through the interpolar spinal trigeminal nucleus. Its’ trigeminothalamic afferents synapse in the ventrolateral portion of the VPM. Extralemniscal thalamocortical afferents have sparse projections to layers 3, 6 and the septa between the L4 barrels of S1 barrel cortex. However, they densely innervate layers 4 and 6 of the secondary somatosensory (S2) whisker-related cortex (see the Scholarpedia chapter by Deschênes, 2009 for details). The extralemniscal pathway conveys only touch signals to the S1 and S2 barrel-related cortex (Yu et al., 2006). Despite its functional relevance, this pathway will not be described in detail in this overview because little is known about their target S1 microcircuits.
The paralemniscal pathway also runs through the interpolar spinal trigeminal nucleus and connects with the posterior medial thalamic nucleus of the thalamus (Pom); the intracortical targets of Pom afferents are described in detail below. In contrast to VPM, the Pom does not show cytoarchitectonic units such as barreloids. The paralemniscal pathway codes only whisker motion information (Yu et al., 2006).
All layers of the barrel cortex receive excitatory synaptic input from at least one of these thalamic nuclei (Alloway, 2008; Meyer et al., 2010a; Oberlaender et al., 2012; Constantinople and Bruno, 2013). In this short review, the focus is on the intracortical sections of these pathways and their interactions.

==Lemniscal thalamocortical targets==

The ''major'' thalamorecipient layer in the somatosensory barrel cortex is layer 4 because it contains the highest density of thalamocortical (TC) axons per dendritic length (Jensen and Killackey, 1987; Chmielowska et al., 1989; Oberlaender et al., 2012). These TC afferents emanate from VPM and target both excitatory and inhibitory neurons in a L4 barrel (Bruno and Simons, 2002). In addition, VPM axons also innervate pyramidal cells and inhibitory GABAergic interneurons in layers 3, 5B and 6A (Meyer et al., 2010b; Meyer et al., 2011; Oberlaender et al., 2012). The majority of their boutons establish synapses onto excitatory neurons because the L4 excitatory neurons outnumber L4 interneurons by far (inhibitory/excitatory neuron ratio in layer 4 ~ 8% vs. 92%; Lefort et al., 2009; Meyer et al., 2011). Synaptic contacts formed by TC axons comprise only about 10-20% of the total number of synaptic contacts in layer 4 (White and Rock, 1979; Benshalom and White, 1986; Schoonover et al., 2014) and are therefore considerably outnumbered by intracortical synaptic connections. Under in vivo conditions, the average amplitude of unitary VPM-L4 spiny neuron EPSPs is ~1 mV suggesting that this synapse is of very low efficacy (Bruno and Sakmann, 2006). However, after whisker stimulation, VPM synaptic input to L4 spiny neurons is highly coincident and synchronous resulting in an efficient TC signal transfer (Jia et al., 2014; Schoonover et al., 2014) and does not require intralaminar amplification (Brumberg et al., 1999; Miller et al., 2001; Bruno and Sakmann, 2006).

[[Image:S1microcircuits_Fig1.png|thumb|400px|right| ‘Canonical neuronal microcircuit’ as proposed by Douglas and Martin (1991).Three groups of neurons interact with each other: ‘smooth’ inhibitory cells, superficial excitatory neurons (P2+3) together with L4 excitatory neurons, and deep layer 5 and 6 neurons. Neurons from each group receive thalamic input, most prominently the superficial  neurons. Note the strong recurrent connectivity in this microcircuit model. Dashed and thicker lines indicate weaker or stronger synaptic drive, respectively. Red, ‘smooth’ inhibitory cells; blue, excitatory connections and cells. Modified from Douglas and Martin (1991) with permission of John Wiley and Sons, Inc.]]

==Paralemniscal thalamocortical targets==

The major target regions of Pom (paralemniscal) TC input are layers 5A, 1 and 2. In addition, Pom axons also innervate the septa between layer 4 barrels (Alloway, 2008; Meyer et al., 2010b; Meyer et al., 2010a; Wimmer et al., 2010; Oberlaender et al., 2012) and layer 3 where they overlap with VPM axons. VPM and Pom inputs have been proposed to be the constituent elements of distinct intracortical columnar pathways, the ‘barrel column’ and the ‘septal column’ (Alloway, 2008). 
In layer 5A, Pom afferents probably establish synaptic contacts with basal dendrites of L5A pyramidal neurons (Petreanu et al., 2009) while in layer 1 and upper layer 2 they may target apical dendritic tufts of L2, L3 and L5 pyramidal neurons as well as L1 and L2 interneurons.

==Excitatory S1 microcircuits==

Excitation by the whisker-related thalamus is distributed within the barrel cortex via many distinct microcircuits. These microcircuits can be grouped into different subnetworks or microcircuits; however, these subnetworks are not separate and independent entities but interact at many different levels.

The first prototypical neuronal microcircuit that describes synaptic signalling from the sensory thalamus to and within a primary sensory cortex was the so-called ‘canonical microcircuit’ by Rodney Douglas and Kevan Martin for the primary visual (V1) cortex (Douglas and Martin, 1991; Binzegger et al., 2004; Douglas and Martin, 2004; <figref>S1microcircuits_Fig1.png</figref>).  It is worth noting that synaptic signalling shown here for the V1 cortex is highly recurrent and reciprocal within and between cortical layers. The morphological and synaptic properties of S1 neuronal microcircuits described in this review were to a large extent obtained from in vitro paired recording studies. An example of such a correlated structural-functional analysis is shown in <figref>S1microcircuits_Fig2.png</figref> for the intralaminar synaptic connection between two neighbouring L2/3 pyramidal cells (Feldmeyer et al., 2006; see also [[#table1|Table 1]]).

[[Image:S1microcircuits_Fig2.png|thumb|650px|left|
Characterization of a synaptic microcircuit in the S1 barrel cortex.
(A) Electrophysiological recordings from synaptically coupled pyramidal cells in layer 2/3. A presynaptic action potential (red trace) elicits unitary EPSPs (grey traces) in the postsynaptic neuron. The bottom trace (black) shows the average time course of a unitary EPSP. (B) Distribution of the coefficient of EPSP amplitude variation (CV) for all recorded L2/3 pyramidal cell pairs. A low CV is indicative of a high reliability of a synaptic connection. (C) The EPSP vs. CV plot shows that even connections with small mean EPSP amplitudes can still reliable in S1 barrel cortex. (D) Biocytin filling of the synaptically coupled neuron pair shown in A. The connection had two synaptic contacts shown in E and F; E1 and F1 show electron microscopic verifications of these synaptic contacts; the small structures containing the white vesicles are the axon boutons. (G) Reconstruction of the L2/3 pyramidal cell pair shown in A and D. (G1) Enlarged dendritic domain of the postsynaptic pyramidal cell; the location of the two synaptic contacts is marked by magenta-coloured circles. Presynaptic dendrites, red; presynaptic axons, blue; postsynaptic dendrites, black; axons, green. Modified from Feldmeyer et al., 2006 with permission of John Wiley and Sons, Inc.]]

==The ‘canonical’ S1 microcircuit==

In this ‘canonical’ S1 microcircuit, afferents from the primary sensory thalamic nucleus target excitatory neurons in the granular and supragranular cortical layers. In addition, inhibitory interneurons receive thalamic input along with pyramidal cells in the infragranular layer, to a lesser extent. Thus, the signal flow in this microcircuit is from granular and supragranular layers to infragranular layers and subsequently to other cortical areas and subcortical brain regions. However, there is a substantial degree of intra- and translaminar feedback excitation. 

<div class="thumb tright" id="table1"><div class="thumbinner" style="width: 100%; max-width: 900px;">
<table style="width=98%; caption-side:bottom; display: block;"
       border="5" 
       frame="hsides" 
       rules="all" 
       cellpadding="10" 
       cellspacing="10">
<caption><div class="thumbcaption">  <span id="Table_124_label">Table 1:</span> Characteristics of excitatory synaptic connections in a ‘canonical’ microcircuit’ of S1 barrel cortex.
Each synaptic connection is characterised by the apparent connectivity, the mean EPSP amplitude, the coefficient of EPSP amplitude variation (CV) and the failure rate (precentage of APs that did not elicit an EPSP). All synaptic parameters listed here were determined in the presence of 2 mM CaCl2 in the aCSF.
L4 exc. neuron: L4 excitatory neuron, i.e. L4 spiny stellate, L4 star pyramid or L4 pyramidal cell. L2/3 PC, pyramidal cells in layer 2 and 3; tt L5 PC, thick-tufted L5 pyramidal cell.
<br/>* for this connection a release probability of 0.8 was determined (Silver et al., 2003).
</div>
</caption>
<tr>
    <th class="tg-031e">Connection type</th>
    <th class="tg-031e">Apparent connectivity</th>
    <th class="tg-031e">mean EPSP amplitude</th>
    <th class="tg-031e">CV</th>
    <th class="tg-031e">Failure rate</th>
    <th class="tg-031e">Species</th>
    <th class="tg-031e">References</th>
  </tr>
  <tr>
    <td class="tg-031e" rowspan="2">L4 exc. neuron → L4 exc.<br>neuron</td>
    <td class="tg-031e">0.3</td>
    <td class="tg-031e">1.6±1.5 mV</td>
    <td class="tg-031e">0.37±0.16</td>
    <td class="tg-031e">5.3±7.8</td>
    <td class="tg-031e">Rat</td>
    <td class="tg-031e">Feldmeyer et al. 1999</td>
  </tr>
  <tr>
    <td class="tg-031e">0.24</td>
    <td class="tg-031e">1.0±0.1 mV</td>
    <td class="tg-031e">n.d.</td>
    <td class="tg-031e">n.d.</td>
    <td class="tg-031e">Mouse</td>
    <td class="tg-031e">Lefort et al., 2009</td>
  </tr>
  <tr>
    <td class="tg-031e" rowspan="3">L4 exc. neuron → L2/3 PC</td>
    <td class="tg-031e">~0.1-0.2</td>
    <td class="tg-031e">0.7±0.6 mV</td>
    <td class="tg-031e">0.27±0.13*</td>
    <td class="tg-031e">4.9±8.8%</td>
    <td class="tg-031e">Rat</td>
    <td class="tg-031e">Feldmeyer et al. 2002</td>
  </tr>
  <tr>
    <td class="tg-031e">0.12 (L2)</td>
    <td class="tg-031e">1.0±0.2 mV (L2</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">Mouse</td>
    <td class="tg-031e">Lefort et al., 2009</td>
  </tr>
  <tr>
    <td class="tg-031e">0.15 (L3)</td>
    <td class="tg-031e">0.6±0.1 mV (L3)</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e"></td>
    <td class="tg-031e"></td>
  </tr>
  <tr>
    <td class="tg-031e" rowspan="4">L2/3 PC → L2/3 PC</td>
    <td class="tg-031e">0.09 (local)</td>
    <td class="tg-031e">0.7±0.6 mV</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">Rat</td>
    <td class="tg-031e">Holmgren<br>et al., 2003</td>
  </tr>
  <tr>
    <td class="tg-031e">~0.1</td>
    <td class="tg-031e">1.0 ± 0.7 mV</td>
    <td class="tg-031e">0.33±0.18</td>
    <td class="tg-031e">3.2±7.8%</td>
    <td class="tg-031e">Rat</td>
    <td class="tg-031e">Feldmeyer et al. 2006</td>
  </tr>
  <tr>
    <td class="tg-031e">0.09 (L2)</td>
    <td class="tg-031e">0.6±0.1 mV (L2)</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">Mouse</td>
    <td class="tg-031e">Lefort et al., 2009</td>
  </tr>
  <tr>
    <td class="tg-031e">0.19 (L3)</td>
    <td class="tg-031e">0.8±0.1 mV (L3)</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e"></td>
    <td class="tg-031e"></td>
  </tr>
  <tr>
    <td class="tg-031e" rowspan="2">L2/3 PC → tt L5 PC</td>
    <td class="tg-031e">0.08 (L2)</td>
    <td class="tg-031e">0.2±0.0 mV (L2)</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">Mouse</td>
    <td class="tg-031e">Lefort et al., 2009</td>
  </tr>
  <tr>
    <td class="tg-031e">0.12 (L3)</td>
    <td class="tg-031e">0.2±0.0 mV (L2)</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e">n.d</td>
    <td class="tg-031e"></td>
    <td class="tg-031e"></td>
  </tr>
  <tr>
    <td class="tg-031e" rowspan="2">tt L5 PC → tt L5 PC</td>
    <td class="tg-031e">~0.1</td>
    <td class="tg-031e">1.3±1.1 mV</td>
    <td class="tg-031e">0.52±0.41</td>
    <td class="tg-031e">14±7%</td>
    <td class="tg-031e">Rat</td>
    <td class="tg-031e">Markram et al., 1997</td>
  </tr>
  <tr>
    <td class="tg-031e">-0.07</td>
    <td class="tg-031e">0.7±0.2 mV</td>
    <td class="tg-031e">n.d.</td>
    <td class="tg-031e">n.d.</td>
    <td class="tg-031e">Mouse</td>
    <td class="tg-031e">Lefort et al., 2009</td>								
</table>
</div></div>

In the S1 barrel cortex, a similar but not identical ‘canonical’ microcircuit exists which can - in approximation - be considered as intracortical part of the lemniscal pathway (Bureau et al., 2006). The main intracortical elements of this subnetwork are: L4 excitatory neurons (spiny stellates, star pyramids and pyramidal cells; Staiger et al., 2004; Oberlaender et al., 2012); L2 and L3 pyramidal cells and L5B pyramidal cells (<figref>S1microcircuits_Fig3.png</figref>). Most studies on identified synaptic connections have concentrated on vertical, feed-forward signalling but a high degree of intralaminar reciprocal synaptic connections have also been identified. In addition to the vertical signal flow in a barrel column, there is mounting evidence for strong horizontal, transcolumnar synaptic signalling in the S1 barrel cortex and to other cortical areas (Zhang and Deschênes, 1997; Deschênes et al., 1998; Bruno et al., 2009; Narayanan et al., 2015). However, they will only be mentioned in passing as part of this review.

[[Image:S1microcircuits_Fig3.png|thumb|600px|right|
Synaptic connections in the ‘canonical’ microcircuit of S1 barrel cortex.
(A) Simplified schematic drawing of synaptic connections in the synaptic connectivity in the S1 barrel cortex. Only L4 excitatory neurons (L4 ExcN: spiny stellate, star pyramids and pyramidal cells), L2, L3 and the thick-tufted (tt) L5B pyramidal cells are included here. (B) Morphological reconstructions of individual pairs of the excitatory synaptic connection depicted in (A): 1, L4-L4 connection, 2, L4-L2/3 connection, 3, L2/3-L2/3 connection, 4, L2-L5B connection and 5, L5B-L5B connection. Reconstructions were obtained from paired recordings and simultaneous biocytin fillings of synaptically coupled neurons in barrel cortex brain slices (B1-B5 modified from Feldmeyer et al., 1999; Silver et al., 2003; Feldmeyer et al., 2006; Reyes et al., 1999; Markram et al., 1997). L4 barrels are depicted in light grey; L2P, L3P, L2 and L3 pyramidal cells; L4ExcN, L4 excitatory neuron, ttL5BP, thick-tufted L5B pyramidal cell. Schematic barrels are depicted in light grey. Colour code as for <figref>S1microcircuits_Fig2.png</figref>G.
]]


In simplified terms, excitation arriving from the VPM results in strong recruitment of L4 excitatory neurons. L3 and L5B pyramidal cells are also recruited, but to a lesser degree. Within a L4 barrel, these neurons are recurrently interconnected with a high connectivity ratio of ~0.3 (see Table 1). Their translaminar targets are mainly pyramidal cells in supragranular layers (i.e. layers 2 and 3; but see below). In particular spiny stellate cells, the most numerous L4 cell type, show a largely ‘barrel column’-confined, vertical axonal projection and innervate pyramidal cells in both layer 2 and 3 (Lübke et al., 2000). L2 and L3 pyramidal cells innervate other pyramidal cells in their ‘home’ layer but provide also substantial synaptic input to thick-tufted pyramidal neurons in infragranular layer 5B. In turn, these L5B pyramidal cells provide output to subcortical target structures such as the thalamus, caudate-putamen, inferior colliculi and cerebellum (e.g. Zingg et al., 2014). The individual intracortical excitatory synaptic connections in this ‘canonical’ microcircuit in the S1 barrel cortex have been characterised in detail. These microcircuits comprise the synaptic connections between L4 excitatory neurons and L2/3 pyramidal cells, between L2/3 pyramidal cells and thick-tufted L5B pyramidal cells as well as the intralaminar reciprocal, recurrent connections between L4, L2/3 and L5B neurons (Markram et al., 1997; Feldmeyer et al., 1999; Feldmeyer et al., 2002; Holmgren et al., 2003; Silver et al., 2003; Feldmeyer et al., 2006; Lefort et al., 2009). <figref>S1microcircuits_Fig3.png</figref> shows a schematic wiring diagram (<figref>S1microcircuits_Fig3.png</figref>A) and morphological reconstructions of these synaptic connections (<figref>S1microcircuits_Fig3.png</figref>B). The majority shows a high release probability, as evidenced by a low EPSP failure rate in response to a presynaptic action potential (AP), a low variation in the EPSP amplitude (low coefficient of EPSP variation, c.v.) and a low paired pulse ratio (see <figref>S1microcircuits_Fig2.png</figref> for an example; Table 1). For the L4-L2/3 connections (<figref>S1microcircuits_Fig3.png</figref>B2), this has been tested directly. In the presence of 2 mM extracellular Ca<sup>2+</sup>, the release probability of L4-L2/3 synapses was 0.8 (Silver et al., 2003). The number of synaptic contacts for individual connections varied between 2 and 8, the majority of which was located on the basal dendrites. 
This data shows that synaptic connections in the ‘canonical’ microcircuit are reliable, thereby ensuring an efficient sensory signal transfer in the barrel column. However, in vivo labelling of the axons of L2/3 and L5 pyramidal cell also revealed a strong and prominent horizontal projection domain both in layers 2, 3 and/or 5. These horizontal collaterals project across the entire barrel field (Bruno et al., 2009; Oberlaender et al., 2011; Narayanan et al., 2015), thereby integrating whisker-touch induced synaptic excitation in different barrel columns. In addition, there are long-range axon collaterals projecting to cortical areas outside the S1 barrel cortex that serve the interaction between is and other cortical areas. (e.g. the sensorimotor loop; see also Petreanu et al., 2007; Aronoff et al., 2010; Mao et al., 2011; Petreanu et al., 2012; Zingg et al., 2014).

==Non-canonical, intracortical neuronal networks== 

Apart from the excitatory neurons in the ‘canonical’ microcircuit described above, there are several other synaptic connection types that do not fit this scheme. In general, these synaptic connections are part of the paralemniscal thalamic pathway from the Pom to the neocortex. However, the ‘paralemniscal’ intracortical microcircuit described here is not a segregated, independent pathway but highly interdigitated with the ‘canonical’, largely lemniscal pathway (<figref>S1microcircuits_Fig4.png</figref>A).
Constituent elements of the intracortical paralemniscal pathway are L5A pyramidal cells as well as the L2, L3 pyramidal cells and the apical tufts of L5B pyramidal cells, since these neurons are located in the major target regions of Pom afferents (<figref>S1microcircuits_Fig4.png</figref>A; Bureau et al., 2006 see also Oberlaender et al., 2012). L4 septal neurons are also part of this microcircuit (see above; Wimmer et al., 2010). The major target neurons for the Pom afferents are the slender-tufted L5A pyramidal cells. These pyramidal cells have an extensive axonal projection in layers 1 and 2 (<figref>S1microcircuits_Fig4.png</figref>B; Oberlaender et al., 2011). The Pom afferents will establish synaptic contacts not only with other L5A pyramidal cells (<figref>S1microcircuits_Fig4.png</figref>C) and L2 pyramidal cells, but also the apical dendritic tufts of pyramidal cells in layer 3, 5A and 5B. This is of functional relevance because the dendritic tuft region of pyramidal cells has a high density of Ca<sup>2+</sup> channels. This site has been shown to be the initiation zone for dendritic Ca<sup>2+</sup> spikes (<figref>S1microcircuits_Fig4.png</figref>A; Larkum et al., 1999; Larkum and Zhu, 2002; for reviews see Spruston, 2008; Larkum, 2013) whose activation is involved in coincidence detection mechanisms. Although the L5A-L2/3 pyramidal cell connectivity should be high (given their axodendritic domains; s. <figref>S1microcircuits_Fig4.png</figref>B), Lefort and coworkers (Lefort et al., 2009) report only low connectivity ratios for supragranular projections (L3: 0.02, L2: 0.04). This is despite the strong synaptic input from these layers (L2: 0.1; L3: 0.06) and the fact that the L2 and L3 pyramidal cell axon density is comparatively lower in layer 5A. These conflicting results are most likely due to slice artifacts (i.e. the truncation of axonal collaterals) but also to the difficulty in detecting EPSPs from synaptic contacts on distal dendritic structures.

[[Image:S1microcircuits_Fig4.png|thumb|600px|right|Synaptic connections in the intracortical paralemniscal microcircuit of S1 barrel cortex
(A) Simplified schematic drawing of synaptic connections in the barrel cortex in the Pom pathway. Note that pyramidal cells in layers 2,3 and 5 receive thalamic input at their apical dendritic tuft where the Ca<sup>2+</sup> spike initiation zone is located (marked by light red ellipse). L2 and L3 pyramidal cell are also likely to receive Pom input onto their basal dendrites. (B) Axonal projection pattern of L5A pyramidal cell filled in vivo revealing an extensive axonal collaterisation at the layer 1/layer 2 border. Modified from Oberlaender et al., 2011. (C) Synaptic connection between two L5A pyramidal cells. Modified from Frick et al., 2008. L2P, L3P, L5A, L5BP: pyramidal cells in layer 2, 3, 5A and 5B, respectively. Barrels are depicted in light grey. Colour code for reconstructions as in <figref>S1microcircuits_Fig2.png</figref>G. Panel B reproduced with permission of the National Academy of Science of the USA.]]

The only synaptic connection in the ‘paralemniscal’ microcircuitry that has been studied in significant detail is the L5A-L5A connection (<figref>S1microcircuits_Fig4.png</figref>C; Frick et al., 2008) which has relatively high connectivity ratio of ~0.2 (Lefort et al., 2009). It exhibits a low EPSP failure rate (2%) and CV (0.3) indicating that it similarly reliable as most other excitatory synaptic connections in the barrel cortex. Synaptic contacts are found on both basal dendrites and in the apical dendritic tuft. To date, the properties of translaminar connections in this ‘paralemniscal’ microcircuit are not known.

==Early convergence of VPM and POm pathways in the S1 barrel cortex==

As mentioned earlier, the lemniscal ‘canonical’ microcircuit and the paralemniscal microcircuit interact at several different stages. First of all, both thick-tufted L5B and L3 pyramidal cells receive monosynaptic and prominent TC input from both VPM (to their basal dendrites) and Pom (to their apical tufts, <figref>S1microcircuits_Fig5.png</figref>A); this input is near-simultaneous. Further interaction occurs at the level of layer 4 and 5A which are the dominant target regions of VPM and Pom TC afferents, respectively. L4 excitatory neurons are also monosynaptically connected to L5A pyramidal cell with a connectivity ratio of 0.1. This connection shows a high reliability (similar to other excitatory connections in the S1 barrel cortex, see table 1); synaptic contacts are established on both basal and apical dendrites. This connection provides another short-latency link between the lemniscal and the paralemniscal pathways in the barrel cortex (<figref>S1microcircuits_Fig5.png</figref>B; Feldmeyer et al., 2005; Bureau et al., 2006; Schubert et al., 2006; Lefort et al., 2009). 
The lemniscal and paralemniscal pathways also converge at several other stages of the neuronal network of the barrel column as shown in <figref>S1microcircuits_Fig4.png</figref>A and <figref>S1microcircuits_Fig5.png</figref>A, albeit disynaptically via slender-tufted L5A pyramidal cells and/or L4 excitatory neurons. For example, L5A pyramidal cells innervate apical tufts of L2, L3 and thick-tufted L5B pyramidal cells, all of which receive monosynaptic (as mentioned earlier) and/or disynaptic VPM input to their basal dendrites (via L4 excitatory neurons; Lefort et al., 2009; Feldmeyer et al., 2002; Staiger et al., 2014; Qi and Feldmeyer, unpublished) (<figref>S1microcircuits_Fig5.png</figref>A). The near-coincident activation of basal dendrites and the apical dendritic tufts of these pyramidal cells through VPM and Pom synaptic input has been suggested to play a role during sensorimotor behavioural paradigms, such as object location during active whisking (Ahissar et al., 2000; Oberlaender et al., 2011). Alternatively, this ‘sensorimotor’ coincidence detection may result from simultaneous synaptic input from both the primary motor cortex and the VPM  (Xu et al., 2012).

[[Image:S1microcircuits_Fig5.png|thumb|600px|left|Interdigitation of lemniscal (VPM) and paralemniscal (Pom) intracortical pathways
(A) Simplified schematic drawing of synaptic connections showing interaction between the two TC pathways. L4 excitatory neurons which receive VPM TC input are connected to excitatory neurons in all cortical layers although the connectivity in granular and supragranular layers is high than in infragranular layers. They interdigitate with L5A pyramidal cells which are the major targets of the Pom TC input. In addition, L5A pyramidal cells innervate also L5B pyramidal cells, which are also target neurons of the VPM TC input on both basal and apical dendrites. Finally, L4 excitatory neurons innervate L2 and L3 pyramidal cells, mostly on their basal dendrites; both neuron types receive either direct or indirect Pom input via Pom afferents and/or L5A pyramidal cell axons. (B) Synaptically coupled pair of a L4 spiny stellate neurons and a slender-tufted L5A pyramidal cell. This synaptic connection represents an early, short latency link between the VPM and Pom TC input into the neocortex. 
L4 barrels are depicted in light grey; L2P, L3P, L2 and L3 pyramidal cells; L4ExcN, L4 excitatory neuron, ttL5BP, thick-tufted L5B pyramidal cell. Colour code for reconstruction as in <figref>S1microcircuits_Fig2.png</figref>G.]]

==Corticothalamic projections==
The S1 barrel cortex contains also several synaptic microcircuits that provide TC-CT feedback. The central elements of this feedback circuit are the L6 corticothalamic (CT) pyramidal cells that receive strong and depressing synaptic input from VPM (<figref>Bursting_Examples.gif</figref>
<figref>S1microcircuits_Fig6.png</figref>A; Beierlein and Connors, 2002; Cruikshank et al., 2010). L6A CT axon project back mainly to the same thalamic nucleus; however, projections to Pom as well as to both of these thalamic nuclei have been described (<figref>S1microcircuits_Fig6.png</figref>A; s. Zhang and Deschênes, 1997; Deschênes et al., 1998). In contrast to pyramidal cells from other cortical layers, the majority of L6A pyramidal cells have short apical dendrites with sparse or even no apical tufts terminating predominantly in layers 3 to 5A. L6A pyramidal cells that provide only CT to VPM are predominantly located in the upper half of layer 6. Most L6A CT pyramidal cells have rather short axons - even when in vivo dye fillings are used - with a narrow axonal domain that is almost confined to a ‘barrel column’. In marked contrast to L6A CT pyramidal cells, corticocortically (CC) projecting pyramidal cells in layer 6A have extensive, profusely branching axons and send collaterals to other cortical areas such as the S2 cortex or motor cortex but have no obvious subcortical target (Zhang and Deschênes, 1997; Kumar and Ohana, 2008; Chen et al., 2009; Tanaka et al., 2011; Pichon et al., 2012). 
In general, L6 pyramidal cells have been reported to receive synaptic input only from layers 4, 5 and 6; the synaptic connectivity is reportedly low for these pathways, ranging from 0.03 to 0.06 (Lefort et al., 2009). Thus, apart from direct, monosynaptic TC VPM input, L4 excitatory neurons and thick-tufted L5B pyramidal cells provide disynaptic VPM input and thus serve as intracortical elements of a TC-CT feedback loop (<figref>S1microcircuits_Fig6.png</figref>B). Translaminar synaptic input showed paired pulse EPSP depression indicative of a high release probability (Qi and Feldmeyer, 2015; see also Mercer et al., 2005; Thomson, 2010). L6A CC and CT pyramidal project also back to layers 5 and 6 (Mercer et al., 2005; Thomson, 2010). In addition, L6 projections to L4 excitatory neurons have been identified in the barrel cortex (Qi et al., 2015, cf. Stratford et al., 1996 for V1 cortex). These connections are unique because they show EPSP facilitation (Qi et al., 2015) in contrast to the paired-pulse depression observed for most other TC and CC connections in the S1 barrel cortex. Thus, L4 excitatory neurons and L6 pyramidal cells also provide a secondary, intracortical feedback control with the L4-L6 connection showing a delayed recruitment because of the paired pulse depression.

[[Image:S1microcircuits_Fig6.png|thumb|600px|right|Synaptic microcircuitry in corticothalamic connections.
Simplified schematic drawing of synaptic connections that play a role in corticothalamic feedback. VPM and its primary intracortical target neurons are shown in red, Pom and its primary cortical target in magenta. Corticothalamic output pathways is coloured in violet. L6A CT pyramidal cells provide synaptic input to the same thalamic nucleus from which they receive synaptic input; in contrast, L5B pyramidal cells receive mainly VPM TC input but project to Pom. L4 excitatory neurons interact with L6A pyramidal cells in an intracortical feedback loop (see text for details). (B) Synaptically coupled pair of a presynaptic L4 spiny stellate neuron and a L6A corticothalamic pyramidal cell. 
L4 barrels are depicted in light grey; L4ExcN, L4 excitatory neuron, L5AP, L5A pyramidal cell; L5BP, thick-tufted L5B pyramidal cell; CT L6AP, L6A CT pyramidal cell. Colour code for reconstruction as in <figref>S1microcircuits_Fig2.png</figref>G.]]

It has been suggested, that the L4 input to L6 CT pyramidal cells is strong and focussed to its home ‘barrel column’, indicating that neurons in this layer are involved in shaping the cortical modulation of activity in the somatosensory thalamus (Tanaka et al., 2011; Qi and Feldmeyer, 2015). Notably, most synaptic contacts established by L4 excitatory neurons are on apical tufts of L6A pyramidal cells (Qi and Feldmeyer, 2015). Under this condition dendritic filtering is substantial, which may explain the low L4-L6 connectivity ratio found in in vitro experiments (Lefort et al., 2009). In addition to the L4 input, a strong synaptic input from L6 itself is likely to exist because CC projecting L6 pyramidal cells have extensive, profusely branching axons that project to other cortical areas such as the S2 cortex or the motor cortex, without obvious subcortical target structures. The connection probability is comparable to other intracortical excitatory connections (Mercer et al., 2005; Qi and Feldmeyer, unpublished; but see Lefort et al., 2009 for lower connectivity ratios). This is another example of a distinct, apical dendritic tuft targeting and basal dendrite targeting synaptic arrangement (as found in VPM and Pom innervation or L4 and L5A input to basal and apical dendritic tufts, respectively, of L5B pyramidal cells) and may serve in the detection of coincident synaptic stimuli.
Another neuronal population involved in CT signalling is a subpopulation of thick-tufted L5B pyramidal cells that is innervated by VPM afferents but projects back to Pom. In this case the CT projection does not target the same thalamic nucleus from which it receives TC input, as is the case for L6A CT pyramidal cells. These L5B CT pyramidal cells may serve as a feedback control of the VPM over the Pom in a VPM-L5B-Pom loop. Thick-tufted L5B pyramidal cell axons receive VPM input (see above) and  generate one or two clusters of large diameter (2-8 µm) presynaptic boutons in Pom (Hoogland et al., 1991; Bourassa et al., 1995; Groh et al., 2008; Groh et al., 2013). L5B-Pom synapses show a high release probability of 0.8 and are therefore very efficacious. Single unitary EPSPs can elicit several APs in the thalamic relay neurons thereby acting as ‘drivers’ of the Pom (Groh et al., 2008). However, spontaneous activity of the L5B pyramidal cells significantly reduces this ‘driving’ action through a strong short-term synaptic depression. Because of this it has been suggested that the L5B-Pom synapse works in two functional modes. When the spontaneous activity of this synapse is high, only synchronous activity of several L5B inputs will induce spiking of the thalamic neurons. Therefore, the synapse will act as a coincidence detector. When the spontaneous activity is sparse (which is the case during active whisking or cortical silence) a single L5B input will ‘fire’ the postsynaptic Pom neuron. Thus, the degree of spontaneous activity determines whether the CT L5B-Pom synapse acts as a detector of synchronous neuronal activity or of cortical silence (Groh et al., 2008).
According to another hypothesis the L5B-Pom connection is part of a feed-forward, trans-thalamic signalling pathway from VPM via L5B pyramidal cells of barrel cortex to Pom and from where it ‘drives’ higher order cortical areas, e.g. the S2 cortex (see e.g. Killackey and Sherman, 2003; Theyel et al., 2010; Sherman and Guillery, 2011; for a review see Guillery and Sherman, 2011). However, it is likely that the L5B CT pyramidal cells are elements in both the feed-forward and the feedback pathways described above.

==Conclusion==

It should be noted that this review provides a simplified concept of the neuronal microcircuits in the S1 barrel cortex. The excitatory S1 microcircuits described here are certainly not separate subnetworks but synaptically interact at several distinct stages; thus, further complicating the understanding of their functional properties. It is likely that with our increasing knowledge of the morphological, electrophysiological and synaptic data from both in vivo and in vitro experiments, we will understand more about the structure-function relationship of barrel cortex synaptic microcircuit, both within a ‘barrel column’ and beyond. 


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